STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thiIProbable tRNA sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. (398 aa)    
Predicted Functional Partners:
CDE29005.1
Aminotransferase class V; Product inferred by homology to UniProt.
 
 0.996
CDE28168.1
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
   
  
 0.931
CDE27019.1
pP-loop family protein; Product inferred by homology to UniProt; Belongs to the TtcA family.
  
 
 0.730
CDE29004.1
Putative septation ring formation regulator EzrA; Product inferred by homology to UniProt.
       0.699
mnmA
tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
 
 
 0.673
CDE27566.1
nOL1/NOP2/sun family protein; Product inferred by homology to UniProt.
  
    0.628
CDE26888.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
     
 0.580
CDE28021.1
Selenium-dependent molybdenum hydroxylase system protein YqeB family; Product inferred by homology to UniProt.
     
 0.580
CDE28022.1
Putative cysteine desulfurase family protein; Product inferred by homology to UniProt.
     
 0.580
CDE27747.1
Metallo-beta-lactamase domain protein; Product inferred by homology to UniProt.
 
  
  0.546
Your Current Organism:
Catenibacterium sp. CAG290
NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290
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