STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE29008.1Hydrolase NUDIX family; Product inferred by homology to UniProt. (177 aa)    
Predicted Functional Partners:
CDE26895.1
Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt.
    
 0.881
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
    
  0.864
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
 0.862
CDE28728.1
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; Product inferred by homology to UniProt.
    
  0.855
CDE28677.1
Pyruvate kinase; Product inferred by homology to UniProt; Belongs to the pyruvate kinase family.
  
 
  0.850
nadE
nAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.828
CDE28669.1
Molybdopterin binding domain protein; Product inferred by homology to UniProt.
 
  
  0.784
CDE27968.1
Putative 5-methyltetrahydrofolate--homocysteine methyltransferase; Product inferred by homology to UniProt.
    
 0.774
CDE28127.1
Competence/damage-inducible domain protein CinA; Product inferred by homology to UniProt; Belongs to the CinA family.
    
  0.742
CDE29038.1
Nicotinate phosphoribosyltransferase; Product inferred by homology to UniProt; Belongs to the NAPRTase family.
    
 0.596
Your Current Organism:
Catenibacterium sp. CAG290
NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290
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