STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE26981.1Nitroreductase family protein; Product inferred by homology to UniProt. (175 aa)    
Predicted Functional Partners:
CDE26982.1
gAF domain protein; Product inferred by homology to UniProt.
       0.773
kptA
Probable RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
       0.773
CDE28552.1
Rubredoxin; Product inferred by homology to UniProt.
  
 
 0.707
CDE27008.1
Rubredoxin; Product inferred by homology to UniProt.
  
 
 0.661
CDE27301.1
Nitroreductase family protein; Product inferred by homology to UniProt.
  
     0.652
pyrK
Dihydroorotate dehydrogenase B (NAD(+)) electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
 
  
 0.635
CDE28665.1
Pyridine nucleotide-disulfide oxidoreductase; Product inferred by homology to UniProt.
  
 
 0.631
CDE29072.1
nADH oxidase; Product inferred by homology to UniProt.
  
 
 0.631
CDE27613.1
Pyridine nucleotide-disulfide oxidoreductase; Product inferred by homology to UniProt.
  
 
 0.631
CDE28375.1
Flavoredoxin; Product inferred by homology to UniProt.
  
 
 0.623
Your Current Organism:
Catenibacterium sp. CAG290
NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290
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