STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE27154.1eDD domain protein DegV family; Product inferred by homology to UniProt. (286 aa)    
Predicted Functional Partners:
CDE28632.1
dAK2 domain fusion protein YloV; Product inferred by homology to UniProt.
 0.996
CDE28122.1
Uncharacterized protein; Product inferred by homology to UniProt.
 
  0.844
CDE28472.1
eDD domain protein DegV family; Product inferred by homology to UniProt.
  
     0.612
rnj
Uncharacterized protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.503
CDE28631.1
Uncharacterized protein; Product inferred by homology to UniProt.
 
    0.499
CDE27152.1
ser/Thr phosphatase family protein; Product inferred by homology to UniProt.
     
 0.498
Your Current Organism:
Catenibacterium sp. CAG290
NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.