STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE27252.1Glycosyl hydrolase family 1; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 1 family. (430 aa)    
Predicted Functional Partners:
CDE27919.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
 
 0.872
CDE28780.1
pTS system sucrose-specific IIBC component; Product inferred by homology to UniProt.
 
 
 0.872
CDE29053.1
pTS system glucose-like IIB component; Product inferred by homology to UniProt.
  
 
 0.872
CDE27254.1
Beta-glucosidase; Product inferred by homology to UniProt.
       0.773
CDE28302.1
Putative PTS system lactose-specific IIC component; Product inferred by homology to UniProt.
  
 
 0.768
CDE27028.1
Ribose-5-phosphate isomerase B; Product inferred by homology to UniProt.
  
 
 0.589
CDE28153.1
Mannose-6-phosphate isomerase class I; Product inferred by homology to UniProt.
 
 
 0.556
CDE27143.1
pTS system N-acetylglucosamine-specific IIBC component; Product inferred by homology to UniProt.
  
 
 0.520
CDE27250.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.509
CDE27805.1
Sugar-phosphate isomerase LacAB/RpiB family; Product inferred by homology to UniProt.
  
 
 0.502
Your Current Organism:
Catenibacterium sp. CAG290
NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290
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