STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE27353.1sIS domain protein; Product inferred by homology to UniProt. (243 aa)    
Predicted Functional Partners:
CDE26895.1
Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt.
  
 
  0.862
CDE27919.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
 
 0.841
CDE28780.1
pTS system sucrose-specific IIBC component; Product inferred by homology to UniProt.
  
 
 0.841
CDE29053.1
pTS system glucose-like IIB component; Product inferred by homology to UniProt.
  
 
 0.841
CDE27053.1
Transcriptional regulator RpiR family; Product inferred by homology to UniProt.
  
     0.768
CDE27453.1
Transcriptional regulator RpiR family; Product inferred by homology to UniProt.
  
     0.767
CDE28008.1
Transcriptional regulator RpiR family; Product inferred by homology to UniProt.
  
     0.766
CDE27891.1
sIS domain protein; Product inferred by homology to UniProt.
  
     0.751
CDE27352.1
Bacterial capsule synthesis protein; Product inferred by homology to UniProt.
       0.718
CDE27888.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.715
Your Current Organism:
Catenibacterium sp. CAG290
NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290
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