STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE27409.1Divergent AAA domain protein; Product inferred by homology to UniProt. (670 aa)    
Predicted Functional Partners:
CDE28101.1
Divergent AAA domain protein; Product inferred by homology to UniProt.
 
 
 
0.557
CDE28051.1
Fic family protein; Product inferred by homology to UniProt.
 
  
  0.526
CDE27408.1
Hydrolase alpha/beta hydrolase fold family protein; Product inferred by homology to UniProt.
  
    0.480
CDE27405.1
Glycosyl hydrolase family 1; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 1 family.
       0.468
CDE27406.1
hD domain protein; Product inferred by homology to UniProt.
       0.468
aroD
3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.
       0.468
CDE28111.1
Transcriptional regulator MarR family; Product inferred by homology to UniProt.
  
  
  0.453
CDE28657.1
Transcriptional regulator MarR family; Product inferred by homology to UniProt.
  
  
  0.453
recG
aTP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
    
  0.444
CDE27981.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
 
  0.427
Your Current Organism:
Catenibacterium sp. CAG290
NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290
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