STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpBV-type ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (482 aa)    
Predicted Functional Partners:
CDE27518.1
Uncharacterized protein; Product inferred by homology to UniProt.
 
 0.999
CDE27519.1
Uncharacterized protein; Product inferred by homology to UniProt; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
CDE27520.1
V-type ATPase 116kDa subunit family protein; Product inferred by homology to UniProt; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
CDE27521.1
Putative V-type sodium ATPase K subunit; Product inferred by homology to UniProt.
 
 0.999
CDE27522.1
Putative ATP synthase subunit F; Product inferred by homology to UniProt.
 
 0.999
CDE27523.1
Putative ATP synthase subunit E; Product inferred by homology to UniProt.
 
 0.999
atpA-2
V-type ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
0.999
atpD-2
V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpE
aTP synthase F0 C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.997
CDE28821.1
dHHA2 domain protein; Product inferred by homology to UniProt.
   
 
  0.867
Your Current Organism:
Catenibacterium sp. CAG290
NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290
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