STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE27568.1nlpC/P60 family protein; Product inferred by homology to UniProt. (447 aa)    
Predicted Functional Partners:
CDE27018.1
n-acetylmuramoyl-L-alanine amidase; Product inferred by homology to UniProt.
 
 
 0.802
CDE27861.1
Efflux ABC transporter permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.773
CDE28440.1
Serine-type D-Ala-D-Ala carboxypeptidase; Product inferred by homology to UniProt; Belongs to the peptidase S11 family.
 
 
 0.765
CDE28162.1
nlpC/P60 family protein; Product inferred by homology to UniProt.
 
  
0.730
CDE29052.1
nlpC/P60 family protein; Product inferred by homology to UniProt.
 
  
0.729
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
  
 0.716
CDE27745.1
Penicillin-binding protein transpeptidase domain protein; Product inferred by homology to UniProt.
 
  
 0.695
CDE28325.1
Penicillin-binding protein 2B; Product inferred by homology to UniProt.
 
  
 0.681
CDE27566.1
nOL1/NOP2/sun family protein; Product inferred by homology to UniProt.
       0.637
CDE27411.1
nlpC/P60 family protein; Product inferred by homology to UniProt.
 
  
0.619
Your Current Organism:
Catenibacterium sp. CAG290
NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290
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