STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE27579.1M42 glutamyl aminopeptidase; Product inferred by homology to UniProt. (342 aa)    
Predicted Functional Partners:
CDE27578.1
Uncharacterized protein; Product inferred by homology to UniProt.
       0.664
CDE27577.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.611
CDE27575.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.577
CDE27576.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.577
CDE27598.1
Aminotransferase class I/II; Product inferred by homology to UniProt.
 
   0.559
metN
aBC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
    
   0.501
CDE27379.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
   0.499
CDE28258.1
Transaminase; Product inferred by homology to UniProt.
  
   0.499
CDE28420.1
Aminotransferase class I/II; Product inferred by homology to UniProt.
  
   0.499
CDE28470.1
Aminotransferase class I and II; Product inferred by homology to UniProt.
  
   0.499
Your Current Organism:
Catenibacterium sp. CAG290
NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290
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