STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE27617.1aBC transporter ATP-binding protein; Product inferred by homology to UniProt. (245 aa)    
Predicted Functional Partners:
CDE27618.1
aBC transporter permease protein; Product inferred by homology to UniProt.
 0.999
CDE28260.1
aBC transporter permease protein; Product inferred by homology to UniProt.
 0.998
CDE27619.1
aBC transporter substrate-binding protein family 3; Product inferred by homology to UniProt.
 
 0.993
CDE27555.1
aBC transporter permease protein; Product inferred by homology to UniProt; Belongs to the binding-protein-dependent transport system permease family.
 
 0.991
CDE28159.1
Branched-chain amino acid ABC transporter permease protein; Product inferred by homology to UniProt; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.958
CDE27821.1
Oligopeptide ABC transporter permease protein OppC; Product inferred by homology to UniProt.
   
 0.947
CDE28261.1
aBC transporter substrate-binding protein family 3; Product inferred by homology to UniProt; Belongs to the bacterial solute-binding protein 3 family.
 
 0.946
CDE28013.1
Molybdate ABC transporter permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
      0.900
CDE27075.1
aBC transporter ATP-binding protein; Product inferred by homology to UniProt.
     
0.900
CDE27076.1
aBC transporter ATP-binding protein; Product inferred by homology to UniProt.
 
     
0.899
Your Current Organism:
Catenibacterium sp. CAG290
NCBI taxonomy Id: 1262767
Other names: C. sp. CAG:290, Catenibacterium sp. CAG:290
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