STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCX35523.1aBC superfamily ATP binding cassette transporter permease/ABC protein; Product inferred by homology to UniProt. (584 aa)    
Predicted Functional Partners:
CCX35875.1
aBC transporter ATP-binding protein; Product inferred by homology to UniProt.
 
 
0.915
CCX35522.1
aBC superfamily ATP binding cassette transporter permease/ABC protein; Product inferred by homology to UniProt.
 
    
0.859
CCX35524.1
Transcriptional regulatory protein; Product inferred by homology to UniProt.
 
   
 0.837
ybeY
Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
   0.816
CCX35835.1
aBC-type multidrug transport system ATPase component; Product inferred by homology to UniProt.
 
 0.794
CCX36623.1
aBC transporter related protein; Product inferred by homology to UniProt.
  
0.758
CCX36496.1
aBC transporter related protein; Product inferred by homology to UniProt.
  
 0.758
CCX36300.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 
 0.741
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.734
CCX35500.1
Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the TtcA family.
  
   0.697
Your Current Organism:
Clostridium sp. CAG1000
NCBI taxonomy Id: 1262768
Other names: C. sp. CAG:1000, Clostridium sp. CAG:1000
Server load: low (24%) [HD]