STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDA62182.1Amidophosphoribosyltransferase; Product inferred by homology to UniProt; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (471 aa)    
Predicted Functional Partners:
CDA61514.1
Phosphoribosylformylglycinamidine synthase; Product inferred by homology to UniProt.
 
 0.999
purD
Phosphoribosylamine--glycine ligase; Product inferred by homology to UniProt; Belongs to the GARS family.
 
 0.992
purM
Phosphoribosylformylglycinamidine cyclo-ligase; Product inferred by homology to UniProt.
 
 0.989
purE
N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
 
 
 0.977
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
 
 0.967
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Product inferred by homology to UniProt; Belongs to the SAICAR synthetase family.
  
 0.967
CDA63016.1
Adenylosuccinate lyase; Product inferred by homology to UniProt; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
 0.959
carB
Carbamoyl-phosphate synthase large chain; Product inferred by homology to UniProt.
 
 
 0.956
CDA61408.1
Carbamoyl-phosphate synthase small chain; Product inferred by homology to UniProt.
  
 
 0.922
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 0.889
Your Current Organism:
Clostridium sp. CAG169
NCBI taxonomy Id: 1262778
Other names: C. sp. CAG:169, Clostridium sp. CAG:169
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