STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDB52076.1Lipopolysaccharide biosynthesis protein; Product inferred by homology to UniProt. (256 aa)    
Predicted Functional Partners:
CDB52075.1
Capsular exopolysaccharide family; Product inferred by homology to UniProt.
 
 0.980
CDB51386.1
Capsular exopolysaccharide family; Product inferred by homology to UniProt.
 
 0.967
CDB51387.1
pHP domain protein; Product inferred by homology to UniProt.
 
 
 0.914
CDB52074.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Product inferred by homology to UniProt.
 
  
 0.835
CDB52073.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
    0.768
CDB51190.1
Nucleotide-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.532
CDB51427.1
Polysaccharide biosynthesis protein; Product inferred by homology to UniProt.
 
    0.494
CDB52077.1
Stress responsive alpha-beta barrel domain-containing protein; Product inferred by homology to UniProt.
       0.437
CDB51541.1
Putative integral membrane protein; Product inferred by homology to UniProt.
 
     0.426
Your Current Organism:
Clostridium sp. CAG217
NCBI taxonomy Id: 1262779
Other names: C. sp. CAG:217, Clostridium sp. CAG:217
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