STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDB91206.1aBC transporter solute-binding protein; Product inferred by homology to UniProt. (441 aa)    
Predicted Functional Partners:
CDB91205.1
Transmembrane permease MsmF; Product inferred by homology to UniProt.
 
 0.995
CDB91204.1
Putative transmembrane permease MsmG; Product inferred by homology to UniProt.
 
 0.994
CDB91203.1
aBC transporter ATP-binding protein; Product inferred by homology to UniProt; Belongs to the ABC transporter superfamily.
 
 0.978
CDB90584.1
aBC transporter permease protein; Product inferred by homology to UniProt.
 
 0.937
CDB90512.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
 0.915
CDB90583.1
aBC transporter permease protein; Product inferred by homology to UniProt.
 
 0.913
CDB91011.1
aBC transporter permease protein; Product inferred by homology to UniProt.
 
 0.907
CDB90943.1
aBC transporter related; Product inferred by homology to UniProt; Belongs to the ABC transporter superfamily.
 
 0.892
CDB90513.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
 0.880
CDB91015.1
aBC transporter permease protein; Product inferred by homology to UniProt.
 
 0.876
Your Current Organism:
Clostridium sp. CAG253
NCBI taxonomy Id: 1262785
Other names: C. sp. CAG:253, Clostridium sp. CAG:253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.