STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDB89846.1Putative uncharacterized protein; Product inferred by homology to UniProt. (564 aa)    
Predicted Functional Partners:
CDB90341.1
Predicted AAA-ATPase; Product inferred by homology to UniProt.
  
     0.759
CDB89980.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.749
CDB90491.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 
 0.623
CDB90794.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.623
CDB88811.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.480
CDB89844.1
aBC-type multidrug transport system ATPase and permease components; Product inferred by homology to UniProt.
       0.405
CDB89845.1
aBC-type multidrug transport system ATPase and permease components; Product inferred by homology to UniProt.
       0.405
Your Current Organism:
Clostridium sp. CAG253
NCBI taxonomy Id: 1262785
Other names: C. sp. CAG:253, Clostridium sp. CAG:253
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