STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDD42773.1Putative peptidoglycan-binding domain-containing protein; Product inferred by homology to UniProt. (426 aa)    
Predicted Functional Partners:
CDD38279.1
Peptidase S8/S53 family; Product inferred by homology to UniProt; Belongs to the peptidase S8 family.
  
 0.820
CDD39172.1
Subtilase family; Product inferred by homology to UniProt.
 
    0.819
CDD40069.1
Stage II sporulation protein P; Product inferred by homology to UniProt.
  
   
 0.725
CDD44882.1
lysM domain; Product inferred by homology to UniProt.
 
  
 0.708
CDD39180.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.678
CDD45128.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
  
 0.661
CDD40597.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.656
CDD43811.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.640
CDD40252.1
Spore coat protein CotS family; Product inferred by homology to UniProt.
  
     0.639
CDD40801.1
Single-stranded DNA-binding protein; Product inferred by homology to UniProt.
  
     0.637
Your Current Organism:
Clostridium sp. CAG299
NCBI taxonomy Id: 1262792
Other names: C. sp. CAG:299, Clostridium sp. CAG:299
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