STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDD42845.1Uncharacterized protein; Product inferred by homology to UniProt. (82 aa)    
Predicted Functional Partners:
CDD42846.1
Uncharacterized protein; Product inferred by homology to UniProt.
 
     0.862
CDD43648.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.747
CDD40690.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.725
CDD45599.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.680
CDD41303.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.665
CDD43428.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.660
CDD43710.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.609
CDD45665.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.607
CDD39844.1
Oxaloacetate decarboxylase gamma chain; Product inferred by homology to UniProt.
  
     0.606
CDD39107.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.579
Your Current Organism:
Clostridium sp. CAG299
NCBI taxonomy Id: 1262792
Other names: C. sp. CAG:299, Clostridium sp. CAG:299
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.