STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDD44395.1aBC transporter permease protein; Product inferred by homology to UniProt. (266 aa)    
Predicted Functional Partners:
CDD44396.1
aBC-type dipeptide/oligopeptide/nickel transport systems permease components; Product inferred by homology to UniProt.
 
 0.991
CDD44394.1
Putative phosphonate C-P lyase system protein PhnK; Product inferred by homology to UniProt; Belongs to the ABC transporter superfamily.
 
 0.987
CDD44397.1
aBC transporter substrate-binding protein family 5; Product inferred by homology to UniProt.
 0.986
CDD38721.1
aBC transporter ATP-binding protein; Product inferred by homology to UniProt; Belongs to the ABC transporter superfamily.
 
 0.981
CDD42851.1
Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the ABC transporter superfamily.
 
 0.974
CDD37872.1
Oligopeptide/dipeptide ABC transporter ATPase subunit; Product inferred by homology to UniProt; Belongs to the ABC transporter superfamily.
 
  0.971
CDD38723.1
Oligopeptide/dipeptide ABC transporter ATP-binding protein C-terminal domain; Product inferred by homology to UniProt; Belongs to the ABC transporter superfamily.
 
 0.970
CDD42259.1
aBC transporter ATP-binding protein; Product inferred by homology to UniProt; Belongs to the ABC transporter superfamily.
 0.964
CDD42256.1
aBC transporter ATP-binding protein; Product inferred by homology to UniProt; Belongs to the ABC transporter superfamily.
 
 0.962
CDD37875.1
aBC-type transporter integral membrane subunit; Product inferred by homology to UniProt.
 
 0.960
Your Current Organism:
Clostridium sp. CAG299
NCBI taxonomy Id: 1262792
Other names: C. sp. CAG:299, Clostridium sp. CAG:299
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.