STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDD09919.1Putative uncharacterized protein; Product inferred by homology to UniProt. (174 aa)    
Predicted Functional Partners:
CDD09017.1
Anti-sigma F factor antagonist; Product inferred by homology to UniProt; Belongs to the anti-sigma-factor antagonist family.
  
   
 0.897
spoIIAB
Anti-sigma regulatory factor serine/threonine protein kinase; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
  
   
 0.896
CDD09307.1
Stage II sporulation protein E protein serine/threonine phosphatase; Product inferred by homology to UniProt.
  
   
 0.890
CDD09921.1
Spore cortex-lytic enzyme; Product inferred by homology to UniProt.
 
   
 0.881
CDD09923.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
     0.877
CDD09153.1
Sporulation transcriptional regulator SpoIIID; Product inferred by homology to UniProt.
  
   
 0.860
CDD08898.1
Stage III sporulation protein AA; Product inferred by homology to UniProt.
  
  
 0.845
CDD10006.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.844
CDD09660.1
Stage V sporulation protein T; Product inferred by homology to UniProt.
  
   
 0.838
CDD08971.1
Sporulation transcription factor Spo0A; Product inferred by homology to UniProt.
  
   
 0.833
Your Current Organism:
Clostridium sp. CAG349
NCBI taxonomy Id: 1262797
Other names: C. sp. CAG:349, Clostridium sp. CAG:349
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.