STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE10527.1hAD superfamily hydrolase; Product inferred by homology to UniProt. (212 aa)    
Predicted Functional Partners:
CDE11557.1
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; Product inferred by homology to UniProt.
 
 
  0.924
CDE10906.1
Transcriptional regulator; Product inferred by homology to UniProt.
  
 
  0.889
CDE10712.1
Alpha-glucan phosphorylase; Product inferred by homology to UniProt.
  
 
 0.882
CDE10528.1
nUDIX hydrolase; Product inferred by homology to UniProt.
  
 
  0.812
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
 
  0.804
CDE10526.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
     0.740
CDE10433.1
Glycosyltransferase 36; Product inferred by homology to UniProt.
    
  0.733
CDE10017.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 0.710
CDE10525.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
    0.698
CDE09915.1
Alcohol dehydrogenase class IV; Product inferred by homology to UniProt; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.688
Your Current Organism:
Clostridium sp. CAG354
NCBI taxonomy Id: 1262799
Other names: C. sp. CAG:354, Clostridium sp. CAG:354
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