STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC12893.1Trehalose utilization protein; Product inferred by homology to UniProt. (245 aa)    
Predicted Functional Partners:
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.773
CDC10875.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
     0.756
CDC12892.1
Methicillin resistance protein; Product inferred by homology to UniProt.
       0.752
CDC12486.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
     0.738
CDC09311.1
Xylose isomerase domain-containing protein TIM barrel; Product inferred by homology to UniProt.
 
     0.733
CDC12680.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
   
    0.667
CDC10876.1
aP endonuclease family 2; Product inferred by homology to UniProt.
 
    0.557
CDC12497.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.549
CDC12895.1
Unknown; No significant homology to UniProt.
       0.512
CDC12896.1
Alpha/beta hydrolase fold protein; Product inferred by homology to UniProt.
       0.512
Your Current Organism:
Clostridium sp. CAG413
NCBI taxonomy Id: 1262803
Other names: C. sp. CAG:413, Clostridium sp. CAG:413
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