STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC09520.1Putative uncharacterized protein; Product inferred by homology to UniProt. (349 aa)    
Predicted Functional Partners:
CDC09523.1
Polysaccharide biosynthesis protein; Product inferred by homology to UniProt.
  
  
 0.877
CDC09522.1
Glycosyltransferase; Product inferred by homology to UniProt.
  
  
 0.851
CDC09521.1
Putative aldo/keto reductase; Product inferred by homology to UniProt.
     
 0.776
CDC10159.1
Capsular polysaccharide biosynthesis protein putative tyrosine-protein kinase; Product inferred by homology to UniProt.
  
  
 0.633
CDC12208.1
O-antigen polymerase family protein; Product inferred by homology to UniProt.
  
    0.606
CDC09506.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
 
 0.491
CDC09488.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 
 0.474
CDC09490.1
Glycosyltransferase; Product inferred by homology to UniProt.
  
 
 0.474
CDC09499.1
Glycosyl transferase family 2/glycosyl transferase family 8; Product inferred by homology to UniProt.
  
 
 0.472
CDC09495.1
Glycosyltransferase family 2; Product inferred by homology to UniProt.
  
 
 0.463
Your Current Organism:
Clostridium sp. CAG413
NCBI taxonomy Id: 1262803
Other names: C. sp. CAG:413, Clostridium sp. CAG:413
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