STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC10282.1Alpha-galactosidase; Product inferred by homology to UniProt. (439 aa)    
Predicted Functional Partners:
CDC10113.1
Uncharacterized protein; Product inferred by homology to UniProt.
 
 
 0.866
CDC09353.1
Putative glucokinase; Product inferred by homology to UniProt.
  
 
 0.801
CDC12519.1
Alpha-alpha-phosphotrehalase TreC; Product inferred by homology to UniProt.
     
 0.796
CDC12550.1
Alpha-galactosidase; Product inferred by homology to UniProt.
    
  0.787
CDC10027.1
Thermostable beta-glucosidase; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 3 family.
     
 0.779
CDC12680.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
  0.761
CDC11507.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
  0.761
CDC10573.1
Alpha amylase catalytic domain protein; Product inferred by homology to UniProt.
   
 
 0.698
uxaC
Uronate isomerase; Product inferred by homology to UniProt.
    
  0.681
CDC11869.1
alpha-L-arabinofuranosidase domain protein; Product inferred by homology to UniProt.
     
 0.678
Your Current Organism:
Clostridium sp. CAG413
NCBI taxonomy Id: 1262803
Other names: C. sp. CAG:413, Clostridium sp. CAG:413
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