STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC11625.1Short-chain dehydrogenase/reductase SDR; Product inferred by homology to UniProt; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (282 aa)    
Predicted Functional Partners:
CDC10285.1
Molybdopterin oxidoreductase; Product inferred by homology to UniProt.
  
 0.996
CDC09250.1
Cyclic nucleotide-binding domain; Product inferred by homology to UniProt.
   
 0.986
uxaC
Uronate isomerase; Product inferred by homology to UniProt.
 
 
 0.974
CDC11310.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 0.974
rnfB
Electron transport complex RnfABCDGE type B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
 0.965
CDC10811.1
Protein tyrosine/serine phosphatase; Product inferred by homology to UniProt.
    
 
 0.938
CDC12311.1
Peptidyl-prolyl cis-trans isomerase cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.936
CDC12491.1
Peptidyl-prolyl cis-trans isomerase cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.936
CDC10937.1
Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt.
    
 0.925
CDC09436.1
Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; Product inferred by homology to UniProt; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.922
Your Current Organism:
Clostridium sp. CAG413
NCBI taxonomy Id: 1262803
Other names: C. sp. CAG:413, Clostridium sp. CAG:413
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