STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDD55016.1Putative uncharacterized protein; Product inferred by homology to UniProt. (95 aa)    
Predicted Functional Partners:
CDD57723.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.743
CDD59898.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.741
CDD58131.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.721
CDD55017.1
single-stranded-DNA-specific exonuclease RecJ; Product inferred by homology to UniProt.
       0.693
CDD55014.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.664
CDD55015.1
azlC family protein; Product inferred by homology to UniProt.
       0.664
CDD58144.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.654
CDD58482.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.630
CDD54550.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.577
CDD55679.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.577
Your Current Organism:
Clostridium sp. CAG43
NCBI taxonomy Id: 1262805
Other names: C. sp. CAG:43, Clostridium sp. CAG:43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.