STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE74019.1Unknown; No significant homology to UniProt. (50 aa)    
Predicted Functional Partners:
CDE74018.1
Unknown; No significant homology to UniProt.
       0.601
rpmF
50S ribosomal protein L32; Product inferred by homology to UniProt; Belongs to the bacterial ribosomal protein bL32 family.
       0.541
CDE74021.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.541
CDE74022.1
Putative domain HDIG-containing protein; Product inferred by homology to UniProt.
       0.541
Your Current Organism:
Clostridium sp. CAG451
NCBI taxonomy Id: 1262809
Other names: C. sp. CAG:451, Clostridium sp. CAG:451
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.