STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDA69185.1Putative uncharacterized protein; Product inferred by homology to UniProt. (267 aa)    
Predicted Functional Partners:
CDA68652.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
 
 0.860
CDA68268.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
  
 0.794
CDA68504.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.771
CDA68897.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.761
CDA68764.1
pEGA domain-containing protein; Product inferred by homology to UniProt.
  
     0.756
CDA67854.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.752
CDA67843.1
Flagellar protein FliZ; Product inferred by homology to UniProt.
  
     0.747
CDA68653.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.743
gyrB
dNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
    
 
 0.727
CDA69506.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
 
 0.727
Your Current Organism:
Clostridium sp. CAG510
NCBI taxonomy Id: 1262816
Other names: C. sp. CAG:510, Clostridium sp. CAG:510
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.