STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDA60879.1Penicilin binding protein; Product inferred by homology to UniProt. (176 aa)    
Predicted Functional Partners:
CDA59707.1
Peptidoglycan glycosyltransferase; Product inferred by homology to UniProt.
 
 0.967
CDA60437.1
Stage V sporulation protein D; Product inferred by homology to UniProt.
   
 0.873
CDA59971.1
Cell cycle protein GpsB; Product inferred by homology to UniProt.
 
 
 
 0.852
CDA59988.1
d-alanyl-D-alanine carboxypeptidase; Product inferred by homology to UniProt; Belongs to the peptidase S11 family.
  
 
 0.822
CDA60562.1
Division protein DivIVA; Product inferred by homology to UniProt.
   
 
 0.773
CDA60151.1
Uncharacterized protein; Product inferred by homology to UniProt; Belongs to the peptidase S11 family.
  
 
 0.749
CDA60164.1
Serine-type D-Ala-D-Ala carboxypeptidase; Product inferred by homology to UniProt; Belongs to the peptidase S11 family.
  
 
 0.749
CDA59977.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
 0.717
CDA60436.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
 0.717
CDA59726.1
erfK/YbiS/YcfS/YnhG family protein; Product inferred by homology to UniProt.
     
 0.703
Your Current Organism:
Clostridium sp. CAG524
NCBI taxonomy Id: 1262817
Other names: C. sp. CAG:524, Clostridium sp. CAG:524
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.