STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDA16508.1Single-strand binding protein/Primosomal replication protein n; Product inferred by homology to UniProt. (230 aa)    
Predicted Functional Partners:
CDA15979.1
dNA polymerase III alpha subunit; Product inferred by homology to UniProt.
   
 0.999
topA
dNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...]
  
 
 0.957
CDA15642.1
Single-stranded DNA-binding protein; Product inferred by homology to UniProt.
     
 0.935
CDA16403.1
aAA ATPase; Product inferred by homology to UniProt.
 
 
 
 0.834
dnaX
dNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
   
 
 0.814
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
  
 0.771
CDA16717.1
Primosomal protein N; Product inferred by homology to UniProt.
   
 
 0.747
CDA16718.1
Primosomal protein N; Product inferred by homology to UniProt.
   
 
 0.747
CDA16719.1
Primosomal protein N; Product inferred by homology to UniProt.
   
 
 0.747
CDA16795.1
Product inferred by homology to UniProt.
   
 
 0.741
Your Current Organism:
Clostridium sp. CAG571
NCBI taxonomy Id: 1262822
Other names: C. sp. CAG:571, Clostridium sp. CAG:571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.