STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC50634.1Sugar kinases ribokinase family; Product inferred by homology to UniProt. (341 aa)    
Predicted Functional Partners:
CDC50633.1
entner-Doudoroff aldolase; Product inferred by homology to UniProt.
 
 0.989
CDC46087.1
Tagaturonate reductase; Product inferred by homology to UniProt.
 
  
 0.868
CDC47887.1
Ribulose-phosphate 3-epimerase; Product inferred by homology to UniProt; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.867
uxuA
Mannonate dehydratase 2; Catalyzes the dehydration of D-mannonate.
 
  
 0.867
CDC46085.1
D-altronate dehydratase; Product inferred by homology to UniProt.
 
  
 0.863
guaA
gMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
 
 0.836
CDC48725.1
gMP synthase 2; Product inferred by homology to UniProt.
  
 
 0.836
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 
 0.825
pgi
Glucose-6-phosphate isomerase; Product inferred by homology to UniProt; Belongs to the GPI family.
  
 
 0.819
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
  
 
 0.814
Your Current Organism:
Clostridium sp. CAG58
NCBI taxonomy Id: 1262824
Other names: C. sp. CAG:58, Clostridium sp. CAG:58
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