STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC44607.1Putative uncharacterized protein; Product inferred by homology to UniProt. (367 aa)    
Predicted Functional Partners:
CDC50120.1
Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt.
  
 
  0.880
CDC49914.1
Predicted oxidoreductases of the aldo/keto reductase family; Product inferred by homology to UniProt.
  
     0.631
CDC46863.1
Uncharacterised ACR YkgG family COG1556; Product inferred by homology to UniProt.
  
   0.573
CDC50264.1
Uncharacterised ACR YkgG family COG1556; Product inferred by homology to UniProt.
  
   0.568
CDC44609.1
Uncharacterized protein; Product inferred by homology to UniProt.
       0.566
pyrK
Dihydroorotate dehydrogenase B (NAD(+)) electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
  
  0.513
CDC48468.1
Sulfide dehydrogenase (Flavoprotein) subunit SudB; Product inferred by homology to UniProt.
  
  0.513
CDC44602.1
Uncharacterized protein; Product inferred by homology to UniProt.
       0.509
CDC44605.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.509
CDC44610.1
Amidohydrolase family protein; Product inferred by homology to UniProt.
       0.468
Your Current Organism:
Clostridium sp. CAG58
NCBI taxonomy Id: 1262824
Other names: C. sp. CAG:58, Clostridium sp. CAG:58
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