STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCY99775.1Unknown; No significant homology to UniProt. (79 aa)    
Predicted Functional Partners:
ligA
dNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
       0.723
CCY99774.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.693
CCY99777.1
cDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Product inferred by homology to UniProt; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.622
CCY99778.1
uPF0182 protein Csac_0864; Product inferred by homology to UniProt.
       0.441
Your Current Organism:
Clostridium sp. CAG793
NCBI taxonomy Id: 1262840
Other names: C. sp. CAG:793, Clostridium sp. CAG:793
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.