STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE96173.1Putative uncharacterized protein; Product inferred by homology to UniProt. (732 aa)    
Predicted Functional Partners:
CDE96172.1
Putative permease; Product inferred by homology to UniProt.
       0.446
CDE96174.1
tadE-like; Product inferred by homology to UniProt.
       0.444
CDE96175.1
Unknown; No significant homology to UniProt.
       0.444
CDE96176.1
Response regulator receiver protein; Product inferred by homology to UniProt.
       0.444
CDE96177.1
Type II secretion system protein E; Product inferred by homology to UniProt.
       0.444
Your Current Organism:
Clostridium sp. CAG914
NCBI taxonomy Id: 1262846
Other names: C. sp. CAG:914, Clostridium sp. CAG:914
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.