STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE82963.1Permease YjgP/YjgQ family protein; Product inferred by homology to UniProt. (381 aa)    
Predicted Functional Partners:
CDE84297.1
aBC transporter related protein; Product inferred by homology to UniProt.
 
 
 0.981
CDE84231.1
Permease YjgP/YjgQ family protein; Product inferred by homology to UniProt.
  
  
  0.944
CDE82961.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.773
CDE82962.1
cDP-diacylglycerol/serine O-phosphatidyltransferase; Product inferred by homology to UniProt; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.773
CDE85550.1
Organic solvent tolerance protein; Product inferred by homology to UniProt.
 
  
 0.723
CDE84988.1
lipid-A-disaccharide synthase; Product inferred by homology to UniProt; Belongs to the LpxB family.
 
     0.694
CDE83022.1
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
     0.681
lpxD
uDP-3-O-acylglucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
 
     0.607
CDE84299.1
Outer membrane protein assembly complex YaeT protein; Product inferred by homology to UniProt.
 
     0.574
CDE84600.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
    
 0.552
Your Current Organism:
Coraliomargarita sp. CAG312
NCBI taxonomy Id: 1262865
Other names: C. sp. CAG:312, Coraliomargarita sp. CAG:312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.