STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCY73488.1trpR family protein YerC/YecD; Product inferred by homology to UniProt. (95 aa)    
Predicted Functional Partners:
CCY73487.1
Methyltransferase domain protein; Product inferred by homology to UniProt.
       0.853
hslO
33 kDa chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.
       0.777
CCY72400.1
Phosphoribosylformylglycinamidine synthase; Product inferred by homology to UniProt.
       0.444
Your Current Organism:
Eubacterium sp. CAG115
NCBI taxonomy Id: 1262878
Other names: E. sp. CAG:115, Eubacterium sp. CAG:115
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