STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCY92450.1Uncharacterized protein; Product inferred by homology to UniProt. (284 aa)    
Predicted Functional Partners:
rpoZ
dNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.770
CCY92872.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.768
CCY91726.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.741
CCY91341.1
Phage capsid family; Product inferred by homology to UniProt.
  
     0.731
CCY91343.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.718
CCY91342.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.714
CCY91793.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.700
CCY91648.1
Uncharacterized protein; Product inferred by homology to UniProt.
  
     0.696
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
  
     0.667
CCY91966.1
pF14277 domain protein; Product inferred by homology to UniProt.
  
     0.655
Your Current Organism:
Eubacterium sp. CAG180
NCBI taxonomy Id: 1262882
Other names: E. sp. CAG:180, Eubacterium sp. CAG:180
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.