STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE93359.1lL-diaminopimelate aminotransferase; Product inferred by homology to UniProt. (414 aa)    
Predicted Functional Partners:
CDE92689.1
Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt.
  
 
 0.921
CDE93072.1
Para-aminobenzoate synthase aminase component / Aminodeoxychorismate lyase; Product inferred by homology to UniProt.
  
 0.825
CDE91350.1
Pyruvate carboxylase beta chain; Product inferred by homology to UniProt.
    
 0.739
CDE93358.1
aBC transporter related; Product inferred by homology to UniProt.
       0.689
CDE92065.1
Transcriptional regulator XRE family; Product inferred by homology to UniProt.
  
  
  0.681
CDE92025.1
Homoserine dehydrogenase; Product inferred by homology to UniProt.
 
 0.638
CDE93356.1
Acetyltransferase; Product inferred by homology to UniProt.
       0.638
CDE93357.1
sTAS domain protein; Product inferred by homology to UniProt.
  
    0.638
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
 
 
 0.625
nadE
nH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.568
Your Current Organism:
Fusobacterium sp. CAG815
NCBI taxonomy Id: 1262901
Other names: F. sp. CAG:815, Fusobacterium sp. CAG:815
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