STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE38064.1Uncharacterized protein; Product inferred by homology to UniProt. (267 aa)    
Predicted Functional Partners:
CDE38414.1
dNA polymerase III delta subunit; Product inferred by homology to UniProt.
 
 
 0.956
CDE38015.1
dNA polymerase III DnaE; Product inferred by homology to UniProt.
  
 0.946
CDE38074.1
dNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
   
 0.929
CDE38063.1
Stage 0 sporulation protein YaaT; Product inferred by homology to UniProt.
  
   0.836
CDE38067.1
Nucleoid-associated protein LLNZ_00655; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
  
  
 0.818
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
  
 0.813
CDE38062.1
Methyltransferase; Product inferred by homology to UniProt; Belongs to the methyltransferase superfamily.
       0.791
CDE38065.1
Unknown; No significant homology to UniProt.
       0.773
CDE38775.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
   
 
 0.752
CDE38778.1
Single-stranded DNA-binding protein; Product inferred by homology to UniProt.
   
 
 0.752
Your Current Organism:
Mycoplasma sp. CAG472
NCBI taxonomy Id: 1262904
Other names: M. sp. CAG:472, Mycoplasma sp. CAG:472
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.