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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDE38320.1Serine-type D-Ala-D-Ala carboxypeptidase; Product inferred by homology to UniProt. (341 aa)    
Predicted Functional Partners:
ddl
d-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
  
 0.825
CDE38028.1
Peptidoglycan glycosyltransferase; Product inferred by homology to UniProt.
     
 0.805
CDE38710.1
erfK/YbiS/YcfS/YnhG family; Product inferred by homology to UniProt.
    
  0.752
CDE38088.1
Penicillin-binding protein; Product inferred by homology to UniProt.
     
 0.710
CDE38646.1
Penicillin-binding protein 1A family; Product inferred by homology to UniProt.
     
 0.710
CDE38440.1
uDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Product inferred by homology to UniProt.
    
 0.617
murF
uDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
    
 0.617
tmcAL
uPF0348 protein FGAG_00248; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.
       0.590
CDE37877.1
Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Product inferred by homology to UniProt; Belongs to the peptidase S11 family.
    
 0.545
CDE38276.1
Serine-type D-Ala-D-Ala carboxypeptidase; Product inferred by homology to UniProt; Belongs to the peptidase S11 family.
    
 0.545
Your Current Organism:
Mycoplasma sp. CAG472
NCBI taxonomy Id: 1262904
Other names: M. sp. CAG:472, Mycoplasma sp. CAG:472
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