STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDB26523.1Transcriptional regulator AraC family; Product inferred by homology to UniProt. (256 aa)    
Predicted Functional Partners:
CDB26527.1
Cation transport ATPase; Product inferred by homology to UniProt.
 
  
 0.909
CDB26529.1
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; Product inferred by homology to UniProt.
 
  
 0.890
CDB26520.1
lytTr DNA-binding domain protein; Product inferred by homology to UniProt.
       0.741
CDB27070.1
Copper-exporting ATPase; Product inferred by homology to UniProt.
 
  
 0.562
CDB26690.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
 
 
 0.470
cobB
nAD-dependent protein deacetylases SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
  
 
  0.404
Your Current Organism:
Oscillibacter sp. CAG241
NCBI taxonomy Id: 1262911
Other names: O. sp. CAG:241, Oscillibacter sp. CAG:241
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.