STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDB27385.1Putative uncharacterized protein; Product inferred by homology to UniProt. (558 aa)    
Predicted Functional Partners:
CDB27383.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
     0.878
CDB27388.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
     0.860
CDB27377.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
     0.803
CDB27287.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.774
CDB27386.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.694
ligA
dNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
 
     0.678
recD2-2
recD/TraA family helicase; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
 
     0.637
dnaG
dNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
    
  0.635
CDB27384.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.571
CDB26658.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
     0.559
Your Current Organism:
Oscillibacter sp. CAG241
NCBI taxonomy Id: 1262911
Other names: O. sp. CAG:241, Oscillibacter sp. CAG:241
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.