STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDB45285.1Efflux transporter RND family MFP subunit; Product inferred by homology to UniProt; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (373 aa)    
Predicted Functional Partners:
CDB45284.1
rND transporter HAE1/HME family permease protein; Product inferred by homology to UniProt; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.985
CDB46233.1
Outer membrane efflux protein; Product inferred by homology to UniProt.
 0.936
CDB45323.1
Putative acriflavine resistance protein B; Product inferred by homology to UniProt; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.906
CDB46395.1
Heavy metal efflux pump CzcA family; Product inferred by homology to UniProt; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.903
CDB45260.1
Efflux ABC transporter permease protein; Product inferred by homology to UniProt.
 
 0.901
CDB45286.1
Transcriptional regulator TetR family; Product inferred by homology to UniProt.
     
 0.734
CDB45259.1
aBC transporter ATP-binding protein; Product inferred by homology to UniProt.
 
 0.713
CDB44997.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
 
 
 0.683
CDB46149.1
Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt.
   
   0.679
metN
Putative D-methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
   
 0.651
Your Current Organism:
Phascolarctobacterium sp. CAG207
NCBI taxonomy Id: 1262914
Other names: P. sp. CAG:207, Phascolarctobacterium sp. CAG:207
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