STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCZ12331.1Peptidoglycan binding protein; Product inferred by homology to UniProt. (527 aa)    
Predicted Functional Partners:
CCZ12330.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.839
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase 1; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
  
 0.706
CCZ12332.1
dNA-directed RNA polymerase sigma subunit RpoE; Product inferred by homology to UniProt; Belongs to the sigma-70 factor family. ECF subfamily.
       0.615
CCZ10992.1
Transglycosylase; Product inferred by homology to UniProt.
  
  
 0.613
CCZ12329.1
Unknown; No significant homology to UniProt.
       0.570
CCZ12333.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.563
CCZ11440.1
Penicillin-binding protein 2; Product inferred by homology to UniProt.
     
 0.562
CCZ12266.1
Penicillin-binding protein transpeptidase domain protein; Product inferred by homology to UniProt.
     
 0.562
CCZ11655.1
Penicillin-binding protein 1A; Product inferred by homology to UniProt.
     
 0.553
CCZ12334.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
    0.548
Your Current Organism:
Prevotella sp. CAG1092
NCBI taxonomy Id: 1262919
Other names: P. sp. CAG:1092, Prevotella sp. CAG:1092
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