STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCY81921.1Cation diffusion facilitator family transporter; Product inferred by homology to UniProt; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (312 aa)    
Predicted Functional Partners:
CCY81019.1
Malate dehydrogenase; Product inferred by homology to UniProt; Belongs to the LDH/MDH superfamily.
  
    0.660
CCY81919.1
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
       0.450
CCY81922.1
Beta-lactamase induction signal transducer AmpG; Product inferred by homology to UniProt.
       0.432
CCY81923.1
Putative glycosyltransferase; Product inferred by homology to UniProt.
       0.426
CCY83542.1
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
     
 0.417
CCY81138.1
Uncharacterized protein; Product inferred by homology to UniProt; Belongs to the sulfur carrier protein TusA family.
       0.412
Your Current Organism:
Prevotella sp. CAG1185
NCBI taxonomy Id: 1262921
Other names: P. sp. CAG:1185, Prevotella sp. CAG:1185
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