STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDA95297.1Transcriptional regulator LacI family; Product inferred by homology to UniProt. (338 aa)    
Predicted Functional Partners:
CDA94388.1
Glutamate synthase large subunit; Product inferred by homology to UniProt.
    
 
 0.877
CDA96213.1
lacI family sugar-binding transcriptional regulator; Product inferred by homology to UniProt.
  
     0.760
CDA95626.1
Alpha-amylase; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.745
CDA94333.1
Glucokinase; Product inferred by homology to UniProt.
 
  
 0.633
CDA93475.1
Carbohydrate kinase PfkB family; Product inferred by homology to UniProt.
 
 
 0.548
ribBA
3 4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
   0.546
guaA
gMP synthase (Glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
   0.546
CDA96365.1
Two-component system sensor histidine kinase/response regulator; Product inferred by homology to UniProt.
  
  
 0.532
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
 0.525
CDA95201.1
Transketolase; Product inferred by homology to UniProt; Belongs to the transketolase family.
   
 0.523
Your Current Organism:
Prevotella sp. CAG1320
NCBI taxonomy Id: 1262922
Other names: P. sp. CAG:1320, Prevotella sp. CAG:1320
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