STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDA96557.1Response regulator receiver domain protein; Product inferred by homology to UniProt. (1302 aa)    
Predicted Functional Partners:
CDA93491.1
aTPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Product inferred by homology to UniProt.
 
0.999
CDA96365.1
Two-component system sensor histidine kinase/response regulator; Product inferred by homology to UniProt.
 
0.999
CDA93523.1
Sensor histidine kinase/DNA-binding response regulator; Product inferred by homology to UniProt.
 
0.998
CDA96205.1
Putative two-component system sensor histidine kinase; Product inferred by homology to UniProt.
  
 0.930
CDA93930.1
nADH dehydrogenase I subunit D; Product inferred by homology to UniProt.
  
 
 0.926
CDA95489.1
Sensor histidine kinase RprX; Product inferred by homology to UniProt.
 
0.926
CDA93118.1
pF11950 family protein; Product inferred by homology to UniProt.
   
 0.925
ribBA
3 4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.904
CDA96202.1
Response regulator receiver domain protein; Product inferred by homology to UniProt.
  
 0.874
CDA96303.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
  
 0.874
Your Current Organism:
Prevotella sp. CAG1320
NCBI taxonomy Id: 1262922
Other names: P. sp. CAG:1320, Prevotella sp. CAG:1320
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