STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC25781.1Putative lipoprotein; Product inferred by homology to UniProt. (295 aa)    
Predicted Functional Partners:
CDC25783.1
aBC transporter ATP-binding protein; Product inferred by homology to UniProt.
  
    0.712
CDC25779.1
Transcriptional regulator GntR family; Product inferred by homology to UniProt.
       0.688
CDC25777.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.645
CDC25703.1
pspC domain protein; Product inferred by homology to UniProt.
  
  
 0.524
CDC25784.1
aBC transporter putative permease; Product inferred by homology to UniProt.
  
    0.506
CDC29312.1
Peptidase M23/M37 family; Product inferred by homology to UniProt.
   
   0.498
CDC24088.1
m23/M37 peptidase domain protein; Product inferred by homology to UniProt.
   
   0.498
CDC27019.1
Putative membrane-bound lytic murein transglycosylase D; Product inferred by homology to UniProt.
    
   0.497
CDC28472.1
lysM domain protein; Product inferred by homology to UniProt.
    
   0.497
CDC25776.1
aBC transporter ATP-binding protein; Product inferred by homology to UniProt.
       0.489
Your Current Organism:
Prevotella sp. CAG386
NCBI taxonomy Id: 1262925
Other names: P. sp. CAG:386, Prevotella sp. CAG:386
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