STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC99131.1Decarboxylase family protein; Product inferred by homology to UniProt; Belongs to the LOG family. (177 aa)    
Predicted Functional Partners:
CDC99372.1
Proton-translocating NADH-quinone oxidoreductase D subunit; Product inferred by homology to UniProt.
    
  0.676
CDC97481.1
2Fe-2S iron-sulfur cluster-binding domain protein; Product inferred by homology to UniProt.
    
  0.591
CDC99361.1
nADH dehydrogenase I m subunit; Product inferred by homology to UniProt.
   
 
  0.590
nuoK
nADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.
   
 
  0.578
CDC99363.1
nADH dehydrogenase I chain L; Product inferred by homology to UniProt.
    
  0.564
CDC98225.1
Pyruvate-flavodoxin oxidoreductase; Product inferred by homology to UniProt.
  
 
  0.467
CDC99019.1
mTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
   
 
 0.451
CDC98356.1
Adenylosuccinate lyase; Product inferred by homology to UniProt; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
  0.445
surE
5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
  0.442
CDC99367.1
nADH-ubiquinone oxidoreductase NQO9 subunit; Product inferred by homology to UniProt.
   
 
  0.435
Your Current Organism:
Prevotella sp. CAG474
NCBI taxonomy Id: 1262926
Other names: P. sp. CAG:474, Prevotella sp. CAG:474
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