STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC99344.1Putative uncharacterized protein; Product inferred by homology to UniProt. (300 aa)    
Predicted Functional Partners:
rpmE2
50S ribosomal protein L31; Product inferred by homology to UniProt.
       0.654
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
   
   0.592
CDC97721.1
Metallo-beta-lactamase domain protein; Product inferred by homology to UniProt.
   
   0.592
CDC98082.1
Pyridine nucleotide-disulfide oxidoreductase; Product inferred by homology to UniProt; Belongs to the sulfur carrier protein TusA family.
    
 
 0.521
polA
dNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.485
CDC99298.1
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
  
     0.471
CDC99339.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.464
CDC99337.1
Uncharacterized protein; Product inferred by homology to UniProt.
 
     0.463
CDC99342.1
Putative uncharacterized protein; Product inferred by homology to UniProt.
       0.419
Your Current Organism:
Prevotella sp. CAG474
NCBI taxonomy Id: 1262926
Other names: P. sp. CAG:474, Prevotella sp. CAG:474
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.